Gene: COL.COLO4_09866

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09866
  • Transcript Identifier COL.rna8661
  • Gene Type Coding gene
  • Location AWUE01014278.1 : 92753-95634 : positive

Gene Family Information

  • ID HOM05D000131
  • #Genes/#Species 2694/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna8661
  • GenBank OMP04196.1
  • id gene9838
  • gene_name COLO4_09866
  • uniprot A0A1R3KAW2

Descriptions

  • Description Pectate lyase/Amb allergen
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0042547
ISO
PLAZA Integrative Orthologycell wall modification involved in multidimensional cell growth AT3G54920
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT3G54920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030570
IEA
GOA Databasepectate lyase activity
GO:0030570
IEA
InterPropectate lyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT5G04310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR002022 Pectate lyase
IPR018082 AmbAllergen
IPR045032 Pectin lyase family
IPR012334 Pectin lyase fold
Mapman id Description
21.3.5.2 Cell wall organisation.pectin.modification and degradation.pectate lyase