Gene: COL.COLO4_09558

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09558
  • Transcript Identifier COL.rna8354
  • Gene Type Coding gene
  • Location AWUE01014247.1 : 35816-37829 : positive

Gene Family Information

  • ID HOM05D001139
  • #Genes/#Species 543/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna8354
  • GenBank OMP04521.1
  • id gene9530
  • gene_name COLO4_09558
  • uniprot A0A1R3KBP7

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055072
IEA
GOA Databaseiron ion homeostasis
GO:0055072
IEA
InterProiron ion homeostasis
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010030
ISO
PLAZA Integrative Orthologypositive regulation of seed germination AT3G23210
GO:0071333
ISO
PLAZA Integrative Orthologycellular response to glucose stimulus AT4G14410
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT5G54680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14410
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G23210
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT3G23210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044818 Transcription factor ILR3-like
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
25.4.2.1.2 Nutrient uptake.metal homeostasis.iron.regulation.signal transduction factor (PRI1)