Gene: COL.COLO4_09277
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_09277
- Transcript Identifier COL.rna8074
- Gene Type Coding gene
- Location AWUE01014193.1 : 5388-7659 : negative
Gene Family Information
- ID HOM05D000969
- #Genes/#Species 618/100
- Phylogenetic origin
- ID ORTHO05D000899
- #Genes/#Species 564/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna8074
- GenBank OMP04807.1
- id gene9249
- gene_name COLO4_09277
- uniprot A0A1R3KCH7
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | ISO | PLAZA Integrative Orthology | vacuolar transport | AT3G52850 |
| GO:0006623 | ISO | PLAZA Integrative Orthology | protein targeting to vacuole | AT2G30290 |
| GO:0006896 | ISO | PLAZA Integrative Orthology | Golgi to vacuole transport | AT3G52850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009940 | ISO | PLAZA Integrative Orthology | amino-terminal vacuolar sorting propeptide binding | AT3G52850 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G52850 |
| GO:0005509 | ISO | PLAZA Homology (enrichment) | calcium ion binding | HOM05D000969 |
| GO:0010209 | ISO | PLAZA Integrative Orthology | vacuolar sorting signal binding | AT3G52850 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017119 | ISO | PLAZA Integrative Orthology | Golgi transport complex | AT2G30290 |
| GO:0005770 | ISO | PLAZA Integrative Orthology | late endosome | AT3G52850 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G52850 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G52850 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G52850 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT3G52850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003137 | PA domain |
| Mapman id | Description |
|---|---|
| 22.3.3.1 | Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.lytic vacuole sorting receptor (VSR) |