Gene: COL.COLO4_08103

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_08103
  • Transcript Identifier COL.rna6906
  • Gene Type Coding gene
  • Location AWUE01013591.1 : 1053-2507 : negative

Gene Family Information

  • ID HOM05D000233
  • #Genes/#Species 1790/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna6906
  • GenBank OMP06489.1
  • id gene8075
  • gene_name COLO4_08103
  • uniprot A0A1R3KHE8

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT5G13910
GO:0010030
ISO
PLAZA Integrative Orthologypositive regulation of seed germination AT5G13910
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT1G28160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G28160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT1G28160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR016177 DNA-binding domain superfamily
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)