Gene: COL.COLO4_07341

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_07341
  • Transcript Identifier COL.rna6151
  • Gene Type Coding gene
  • Location AWUE01013232.1 : 4710-7141 : positive

Gene Family Information

  • ID HOM05D004303
  • #Genes/#Species 165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna6151
  • GenBank OMP07441.1
  • id gene7313
  • gene_name COLO4_07341
  • uniprot A0A1R3KK27

Descriptions

  • Description H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G08180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IEA
InterPronucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR002415 H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR029064 50S ribosomal protein L30e-like
Mapman id Description
16.2.1.3.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (NHP2L1/SNU13)