Gene: COL.COLO4_07117

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_07117
  • Transcript Identifier COL.rna5929
  • Gene Type Coding gene
  • Location AWUE01013094.1 : 20019-22348 : positive

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna5929
  • GenBank OMP07708.1
  • id gene7089
  • gene_name COLO4_07117
  • uniprot A0A1R3KL29

Descriptions

  • Description Transcription factor, SBP-box
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048653
ISO
PLAZA Integrative Orthologyanther development AT5G50570
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G50570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G50570
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G50670

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036893 SBP domain superfamily
IPR044817 Squamosa promoter-binding-like protein
IPR004333 SBP domain
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)