Gene: COL.COLO4_06894
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_06894
- Transcript Identifier COL.rna5708
- Gene Type Coding gene
- Location AWUE01012979.1 : 50068-53366 : positive
Gene Family Information
- ID HOM05D000109
- #Genes/#Species 3058/96
- Phylogenetic origin
- ID ORTHO05D000210
- #Genes/#Species 1382/87
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna5708
- GenBank OMP07971.1
- id gene6866
- gene_name COLO4_06894
- uniprot A0A1R3KLM2
Descriptions
- Description Ionotropic glutamate receptor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G04110 |
| GO:0030003 | ISO | PLAZA Integrative Orthology | cellular cation homeostasis | AT3G04110 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT3G04110 |
| GO:0006816 | ISO | PLAZA Integrative Orthology | calcium ion transport | AT3G04110 |
| GO:0034220 | IEA | GOA Database | ion transmembrane transport | |
| GO:0006814 | ISO | PLAZA Integrative Orthology | sodium ion transport | AT3G04110 |
| GO:0006813 | ISO | PLAZA Integrative Orthology | potassium ion transport | AT3G04110 |
| GO:0006811 | IEA | GOA Database | ion transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005267 | ISO | PLAZA Integrative Orthology | potassium channel activity | AT3G04110 |
| GO:0005261 | ISO | PLAZA Integrative Orthology | cation channel activity | AT3G04110 |
| GO:0005272 | ISO | PLAZA Integrative Orthology | sodium channel activity | AT3G04110 |
| GO:0005262 | ISO | PLAZA Integrative Orthology | calcium channel activity | AT3G04110 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G48400 |
| GO:0015276 | IEA | GOA Database | ligand-gated ion channel activity | |
| GO:0015276 | IEA | InterPro | ligand-gated ion channel activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001320 | Ionotropic glutamate receptor |
| IPR028082 | Periplasmic binding protein-like I |
| IPR017103 | Ionotropic glutamate receptor, plant |
| IPR044440 | Plant glutamate receptor, periplasmic ligand-binding domain |
| IPR001828 | Receptor, ligand binding region |
| IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF |
| Mapman id | Description |
|---|---|
| 24.3.9 | Solute transport.channels.ligand-gated cation channel (GLR) |