Gene: COL.COLO4_06547
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_06547
- Transcript Identifier COL.rna5363
- Gene Type Coding gene
- Location AWUE01012769.1 : 3261-4474 : negative
Gene Family Information
- ID HOM05D000834
- #Genes/#Species 714/100
- Phylogenetic origin
- ID ORTHO05D000909
- #Genes/#Species 559/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna5363
- GenBank OMP08362.1
- id gene6519
- gene_name COLO4_06547
- uniprot A0A1R3KMQ0
Descriptions
- Description Pyridoxal phosphate-dependent decarboxylase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006520 | IEA | GOA Database | cellular amino acid metabolic process | |
| GO:0006520 | IEA | InterPro | cellular amino acid metabolic process | |
| GO:0019752 | IEA | GOA Database | carboxylic acid metabolic process | |
| GO:0019752 | IEA | InterPro | carboxylic acid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016831 | IEA | GOA Database | carboxy-lyase activity | |
| GO:0016831 | IEA | InterPro | carboxy-lyase activity | |
| GO:0016830 | IEA | GOA Database | carbon-carbon lyase activity | |
| GO:0016830 | IEA | InterPro | carbon-carbon lyase activity | |
| GO:0030170 | IEA | GOA Database | pyridoxal phosphate binding | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR002129 | Pyridoxal phosphate-dependent decarboxylase |
| IPR010977 | Aromatic-L-amino-acid decarboxylase |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| Mapman id | Description |
|---|---|
| 4.2.8.3 | Amino acid metabolism.degradation.aromatic amino acid.aromatic amino acid decarboxylase |