Gene: COL.COLO4_06420

General Information

Structural Information

Species Corchorus olitorius
Gene Identifier COL.COLO4_06420
Transcript Identifier COL.rna5237
Gene Type Coding gene
Location AWUE01012698.1 : 45072-47654 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid rna5237
GenBank OMP08484.1
id gene6392
gene_name COLO4_06420
uniprot A0A1R3KN40

Descriptions

Short descriptions
Ortholog descriptions

Description hypothetical protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT3G49170

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT3G49170

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR032867	DYW domain
IPR002885	Pentatricopeptide repeat

Mapman id	Description
16.11.3.3.4.55	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (ECD1)