Gene: COL.COLO4_05708

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05708
  • Transcript Identifier COL.rna4529
  • Gene Type Coding gene
  • Location AWUE01012435.1 : 12029-17715 : positive

Gene Family Information

  • ID HOM05D003126
  • #Genes/#Species 219/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4529
  • GenBank OMP09200.1
  • id gene5680
  • gene_name COLO4_05708
  • uniprot A0A1R3KQ49

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900364
IEA
GOA Databasenegative regulation of mRNA polyadenylation
GO:1900364
IEA
InterPronegative regulation of mRNA polyadenylation
GO:0043488
IEA
GOA Databaseregulation of mRNA stability
GO:0043488
IEA
InterProregulation of mRNA stability
GO:0006397
ISO
PLAZA Homology (enrichment)mRNA processing HOM05D003126

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008143
IEA
GOA Databasepoly(A) binding
GO:0008143
IEA
InterPropoly(A) binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040366 Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.2 not assigned.not annotate