Gene: COL.COLO4_04929

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_04929
  • Transcript Identifier COL.rna3750
  • Gene Type Coding gene
  • Location AWUE01012081.1 : 29249-31683 : negative

Gene Family Information

  • ID HOM05D000181
  • #Genes/#Species 2101/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna3750
  • GenBank OMP09999.1
  • id gene4901
  • gene_name COLO4_04929
  • uniprot A0A1R3KSH1

Descriptions

  • Description Peptidase M41
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010304
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II catabolic process AT5G15250
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004176
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004222
IEA
GOA Databasemetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G15250
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037219 Peptidase M41-like
IPR005936 Peptidase, FtsH
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000642 Peptidase M41
IPR003959 ATPase, AAA-type, core
Mapman id Description
1.1.1.4.2 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.protease (FtsH2/8)
19.4.5.8.2.1 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.component FtsH1/2/5/6/8