Gene: AT5G15250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G15250
  • Transcript Identifier AT5G15250.2
  • Gene Type Coding gene
  • Location Chr5 : 4951071-4952777 : negative

Gene Family Information

  • ID HOM05D000181
  • #Genes/#Species 2101/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G15250.2
  • symbol FTSH6
  • Alias ATFTSH6
  • uniprot Q1PDW5

Descriptions

  • Description FTSH protease 6
  • Computational description FTSH protease 6 (FTSH6); CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 36407 Blast hits to 33937 proteins in 3209 species: Archae - 1599; Bacteria - 12070; Metazoa - 5030; Fungi - 3920; Plants - 3423; Viruses - 32; Other Eukaryotes - 10333 (source: NCBI BLink).
  • Computational description FTSH protease 6 (FTSH6); CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41, FtsH extracellular (InterPro:IPR011546), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IBA
Gene Ontologyproteolysis1
GO:0010304
IEP
Gene OntologyPSII associated light-harvesting complex II catabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0008270
ISS
IEA
Gene Ontologyzinc ion binding2
GO:0008270
IEA
InterProzinc ion binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004222
IEA
Gene Ontologymetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0004176
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
ISS, IBA
Gene OntologyATP-dependent peptidase activity1 3
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008233
IMP
Gene Ontologypeptidase activity2
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0009579
IEA
GOA Databasethylakoid
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
Gene Ontologychloroplast4
GO:0009536
IEA
GOA Databaseplastid
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009534
IBA
Gene Ontologychloroplast thylakoid1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011546 Peptidase M41, FtsH extracellular
IPR003959 ATPase, AAA-type, core
Mapman id Description
35.1 not assigned.annotated