Gene: COL.COLO4_02308

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_02308
  • Transcript Identifier COL.rna1397
  • Gene Type Coding gene
  • Location AWUE01005192.1 : 172-678 : negative

Gene Family Information

  • ID HOM05D001133
  • #Genes/#Species 544/79
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna1397
  • GenBank OMP13085.1
  • id gene2290
  • gene_name COLO4_02308
  • uniprot A0A1R3L168

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid ATCG00490
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion ATCG00490
GO:0015977
IEA
GOA Databasecarbon fixation
GO:0015977
IEA
InterProcarbon fixation
GO:0019253
IEA
GOA Databasereductive pentose-phosphate cycle
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0009853
IEA
GOA Databasephotorespiration

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00490
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00490
GO:0000287
ISO
PLAZA Homology (enrichment)magnesium ion binding HOM05D001133
GO:0016984
IEA
GOA Databaseribulose-bisphosphate carboxylase activity
GO:0016984
IEA
InterProribulose-bisphosphate carboxylase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0004497
IEA
GOA Databasemonooxygenase activity
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome ATCG00490
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00490
GO:0005618
ISO
PLAZA Integrative Orthologycell wall ATCG00490
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast ATCG00490
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00490
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00490
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00490
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope ATCG00490
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma ATCG00490
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033966 RuBisCO
IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
IPR036422 RuBisCO large subunit, N-terminal domain superfamily
Mapman id Description
35.1 not assigned.annotated