Gene: COL.COLO4_00413

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_00413
  • Transcript Identifier COL.rna376
  • Gene Type Coding gene
  • Location AWUE01002421.1 : 601-3794 : negative

Gene Family Information

  • ID HOM05D000825
  • #Genes/#Species 721/98
  • Phylogenetic origin
  • ID ORTHO05D162203
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna376
  • GenBank OMP14022.1
  • id gene412
  • gene_name COLO4_00413
  • uniprot A0A1R3L3V4

Descriptions

  • Description Short-chain dehydrogenase/reductase SDR
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004826
IEA
GOA Databasephenylalanine-tRNA ligase activity
GO:0004826
IEA
InterProphenylalanine-tRNA ligase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016829
IEA
InterProlyase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002220 DapA-like
IPR013785 Aldolase-type TIM barrel
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
IPR005146 B3/B4 tRNA-binding domain
Mapman id Description
35.2 not assigned.not annotate