Gene: CDE10G0739
General Information
Structural Information
- Species Ceratophyllum demersum
- Gene Identifier CDE10G0739
- Transcript Identifier CDE10G0739.1
- Gene Type Coding gene
- Location 8 : 8635590-8650993 : positive
Gene Family Information
- ID HOM05D000032
- #Genes/#Species 5307/100
- Phylogenetic origin
- ID ORTHO05D002227
- #Genes/#Species 305/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name gene_prefix20778
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G08620 |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc01g095740.4 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT5G08620 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G08620 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT5G08620 |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc01g095740.4 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G08610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G08610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001471 | AP2/ERF domain |
| IPR001650 | Helicase, C-terminal |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR016177 | DNA-binding domain superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR036955 | AP2/ERF domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.7.2 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB) |