Gene: CBR_g6734

General Information

Structural Information

  • Species Chara braunii
  • Gene Identifier CBR_g6734
  • Transcript Identifier GBG70607
  • Gene Type Coding gene
  • Location BFEA01000133 : 2088010-2094162 : negative

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid GBG70607
  • uniprot A0A388KKQ0

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g110990.2
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0003724
IEA
InterProRNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IEA
GOA Databaseplasmodesma
GO:0005829
IEA
GOA Databasecytosol
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR007502 Helicase-associated domain
IPR011709 Domain of unknown function DUF1605
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003029 S1 domain
IPR011545 DEAD/DEAH box helicase domain
IPR044762 DHX8/ Prp22, DEXH-box helicase domain
IPR012340 Nucleic acid-binding, OB-fold
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR022967 RNA-binding domain, S1
Mapman id Description
16.2.7.1.5 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp2)