Gene: CBR_g32225
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g32225
- Transcript Identifier GBG59209
- Gene Type Coding gene
- Location BFEA01000003 : 4643411-4645658 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000424
- #Genes/#Species 950/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid GBG59209
- uniprot A0A388JN14
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009828 | ISO | PLAZA Integrative Orthology | plant-type cell wall loosening | AT5G66460 |
| GO:0010047 | ISO | PLAZA Integrative Orthology | fruit dehiscence | AT5G66460 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT4G28320 |
| GO:0010412 | ISO | PLAZA Integrative Orthology | mannan metabolic process | AT2G20680 |
| GO:1990059 | ISO | PLAZA Integrative Orthology | fruit valve development | AT5G66460 |
| GO:0071704 | IEA | GOA Database | organic substance metabolic process | |
| GO:0071704 | IEA | InterPro | organic substance metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016985 | ISO | PLAZA Integrative Orthology | mannan endo-1,4-beta-mannosidase activity | Solyc01g008710.5.1 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071944 | ISO | PLAZA Integrative Orthology | cell periphery | AT5G66460 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | Solyc01g008710.5.1 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.3.2.2 | Cell wall organisation.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase |