Gene: CBR_g27784
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g27784
- Transcript Identifier GBG78560
- Gene Type Coding gene
- Location BFEA01000298 : 705073-730839 : negative
Gene Family Information
- ID HOM05D000809
- #Genes/#Species 730/100
- Phylogenetic origin
- ID ORTHO05D001196
- #Genes/#Species 459/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG78560
- uniprot A0A388L8B7
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070417 | ISO | PLAZA Integrative Orthology | cellular response to cold | AT5G57380 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT4G30200 |
| GO:0016571 | ISO | PLAZA Integrative Orthology | histone methylation | AT3G24440 |
| GO:0051571 | ISO | PLAZA Integrative Orthology | positive regulation of histone H3-K4 methylation | AT3G24440 |
| GO:0048575 | ISO | PLAZA Integrative Orthology | short-day photoperiodism, flowering | AT3G24440 |
| GO:0048587 | ISO | PLAZA Integrative Orthology | regulation of short-day photoperiodism, flowering | AT4G30200 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT3G24440 |
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT5G57380 |
| GO:0032922 | ISO | PLAZA Integrative Orthology | circadian regulation of gene expression | AT4G30200 |
| GO:0048572 | ISO | PLAZA Integrative Orthology | short-day photoperiodism | AT3G24440 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G24440 |
| GO:1900111 | ISO | PLAZA Integrative Orthology | positive regulation of histone H3-K9 dimethylation | AT4G30200 |
| GO:0061087 | ISO | PLAZA Integrative Orthology | positive regulation of histone H3-K27 methylation | AT3G24440 |
| GO:0031062 | ISO | PLAZA Integrative Orthology | positive regulation of histone methylation | AT3G24440 |
| GO:0045814 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression, epigenetic | AT3G24440 |
| GO:0010048 | IEA | GOA Database | vernalization response | |
| GO:0010048 | IEA | InterPro | vernalization response | |
| GO:0040029 | IEA | GOA Database | regulation of gene expression, epigenetic | |
| GO:0040029 | IEA | InterPro | regulation of gene expression, epigenetic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0035064 | ISO | PLAZA Integrative Orthology | methylated histone binding | AT4G30200 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT4G30200 |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | AT3G24440 |
| GO:0031519 | ISO | PLAZA Integrative Orthology | PcG protein complex | AT4G30200 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G30200 |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT3G24440 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR003961 | Fibronectin type III |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR032881 | Oberon, PHD finger domain |
| IPR001965 | Zinc finger, PHD-type |
| IPR013783 | Immunoglobulin-like fold |
| IPR036116 | Fibronectin type III superfamily |
| IPR044514 | Vernalization insensitive 3-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |