Gene: CARHR030840

General Information

Structural Information

  • Species Cardamine hirsuta
  • Gene Identifier CARHR030840
  • Transcript Identifier CARHR030840.3
  • Gene Type Coding gene
  • Location Chr1 : 11847465-11850406 : positive

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CARHR030840.3

Descriptions

  • Description ATP-dependent helicase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
IEA
InterProDNA recombination
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G31360
GO:0032508
ISO
PLAZA Integrative OrthologyDNA duplex unwinding AT1G31360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G31360
GO:0009378
ISO
PLAZA Integrative Orthologyfour-way junction helicase activity AT1G31360
GO:0043138
ISO
PLAZA Integrative Orthology3'-5' DNA helicase activity AT1G31360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT1G31360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
15.3.4.4.5.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.other components.component MED34