Gene: CARHR005720

General Information

Structural Information

Species Cardamine hirsuta
Gene Identifier CARHR005720
Transcript Identifier CARHR005720.1
Gene Type Coding gene
Location Chr1 : 1937229-1939093 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005109
#Genes/#Species 147/89
Phylogenetic origin

ID ORTHO05D006084
#Genes/#Species 147/88
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid CARHR005720.1

Descriptions

Short descriptions
Ortholog descriptions

Description Rho termination factor

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006353	IEA	InterPro	DNA-templated transcription, termination
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT1G06190
GO:1901259	ISO	PLAZA Integrative Orthology	chloroplast rRNA processing	AT1G06190
GO:0010239	ISO	PLAZA Integrative Orthology	chloroplast mRNA processing	AT1G06190

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G06190
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G06190
GO:0019843	ISO	PLAZA Integrative Orthology	rRNA binding	AT1G06190
GO:0043621	ISO	PLAZA Integrative Orthology	protein self-association	AT1G06190

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G06190

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011112	Rho termination factor, N-terminal
IPR036361	SAP domain superfamily

Mapman id	Description
15.3.6.2.4	RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.plastidial DNA:RNA hybrid helicase (RHON1)