Gene: C09p16520
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C09p16520
- Transcript Identifier C09p16520
- Gene Type Coding gene
- Location C09 : 11319263-11321920 : positive
Gene Family Information
- ID HOM05D005554
- #Genes/#Species 138/98
- Phylogenetic origin
- ID ORTHO05D007823
- #Genes/#Species 126/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C09p16520.1_BnaDAR
- v5 BnaC09g11420D
- single_cell_id C09p16520.1-BnaDAR
- ensembl GSBRNA2T00032758001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009058 | IEA | InterPro | biosynthetic process | |
| GO:0008360 | IEA | InterPro | regulation of cell shape | |
| GO:0051301 | IEA | InterPro | cell division | |
| GO:0010020 | ISO | PLAZA Integrative Orthology | chloroplast fission | AT1G63680 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | Zm00001eb391750 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G63680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016874 | IEA | InterPro | ligase activity | |
| GO:0016881 | IEA | InterPro | acid-amino acid ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G63680 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT1G63680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035911 | MurE/MurF, N-terminal |
| IPR000713 | Mur ligase, N-terminal catalytic domain |
| IPR036565 | Mur-like, catalytic domain superfamily |
| IPR013221 | Mur ligase, central |
| IPR036615 | Mur ligase, C-terminal domain superfamily |
| IPR004101 | Mur ligase, C-terminal |
| IPR005761 | UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase |
| Mapman id | Description |
|---|---|
| 13.6.1.8.2.3 | Cell cycle organisation.organelle division.plastid division.peptidoglycan system.UDP-N-acetylmuramic acid pentapeptide formation.enzyme MurE |
| 15.6.1.2.2.11 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP11/MURE |