Gene: C08p12540
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C08p12540
- Transcript Identifier C08p12540
- Gene Type Coding gene
- Location C08 : 16682329-16687904 : negative
Gene Family Information
- ID HOM05D001043
- #Genes/#Species 582/100
- Phylogenetic origin
- ID ORTHO05D001555
- #Genes/#Species 390/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C08p12540.1_BnaDAR
- v5 BnaCnng06700D
- single_cell_id C08p12540.1-BnaDAR
- ensembl GSBRNA2T00051536001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006457 | IEA | InterPro | protein folding | |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT1G09210 |
| GO:0034976 | ISO | PLAZA Integrative Orthology | response to endoplasmic reticulum stress | AT1G09210 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0051082 | IEA | InterPro | unfolded protein binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | InterPro | endoplasmic reticulum | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G09210 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G09210 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009033 | Calreticulin/calnexin, P domain superfamily |
| IPR001580 | Calreticulin/calnexin |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR005225 | Small GTP-binding protein domain |
| IPR006689 | Small GTPase superfamily, ARF/SAR type |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Mapman id | Description |
|---|---|
| 19.1.1.1.1.2 | Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CRT) |
| 22.1.1.2.1 | Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.small GTPase (Sar1) |