Gene: C05p44540
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C05p44540
- Transcript Identifier C05p44540
- Gene Type Coding gene
- Location C05 : 42255782-42308380 : negative
Gene Family Information
- ID HOM05D002605
- #Genes/#Species 262/100
- Phylogenetic origin
- ID ORTHO05D004431
- #Genes/#Species 181/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C05p44540.1_BnaDAR
- v5 BnaC05g32560D
- single_cell_id C05p44540.1-BnaDAR
- ensembl GSBRNA2T00026905001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006470 | ISO | PLAZA Integrative Orthology | protein dephosphorylation | AT3G19980 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT3G19980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | InterPro | hydrolase activity | |
| GO:0004722 | ISO | PLAZA Integrative Orthology | protein serine/threonine phosphatase activity | AT1G50370 |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT1G50370 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G50370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G19980 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G19980 |
| GO:0000159 | ISO | PLAZA Integrative Orthology | protein phosphatase type 2A complex | AT3G19980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029052 | Metallo-dependent phosphatase-like |
| IPR006186 | Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase |
| IPR008547 | Protein of unknown function DUF829, TMEM53 |
| IPR029058 | Alpha/Beta hydrolase fold |
| IPR004843 | Calcineurin-like phosphoesterase domain, ApaH type |
| Mapman id | Description |
|---|---|
| 18.4.25.1.5 | Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP6-class phosphatase |