Gene: C04p67110

General Information

Structural Information

  • Species Brassica napus
  • Gene Identifier C04p67110
  • Transcript Identifier C04p67110
  • Gene Type Coding gene
  • Location C04 : 62466941-62470257 : negative

Gene Family Information

  • ID HOM05D003924
  • #Genes/#Species 178/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid C04p67110.1_BnaDAR
  • v5 BnaC04g46150D
  • single_cell_id C04p67110.1-BnaDAR
  • ensembl GSBRNA2T00155241001

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
IEA
InterPronuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0048571
ISO
PLAZA Integrative Orthologylong-day photoperiodism AT2G39260
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G39260
GO:0009863
ISO
PLAZA Integrative Orthologysalicylic acid mediated signaling pathway AT2G39260
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT2G39260
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT2G39260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G39260
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D003924
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G39260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G39260
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G39260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR016021 MIF4G-like domain superfamily
IPR039762 Nonsense-mediated mRNA decay protein Nmd2/UPF2
IPR007193 Up-frameshift suppressor 2, C-terminal
Mapman id Description
35.1 not assigned.annotated