Gene: BraSC25t45845Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraSC25t45845Z
- Transcript Identifier BraSC25t45845Z
- Gene Type Coding gene
- Location Brapa_scaffold_25 : 1147161-1148600 : positive
Gene Family Information
- ID HOM05D001133
- #Genes/#Species 544/79
- Phylogenetic origin
- ID ORTHO05D000941
- #Genes/#Species 544/80
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- uniprot Q6Y9Y9
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015977 | IEA | GOA Database | carbon fixation | |
| GO:0015977 | IEA | InterPro | carbon fixation | |
| GO:0009737 | IEA | GOA Database | response to abscisic acid | |
| GO:0046686 | IEA | GOA Database | response to cadmium ion | |
| GO:0015979 | IEA | GOA Database | photosynthesis | |
| GO:0009853 | IEA | GOA Database | photorespiration | |
| GO:0019253 | IEA | GOA Database | reductive pentose-phosphate cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00490 |
| GO:0000287 | IEA | GOA Database | magnesium ion binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0016984 | IEA | GOA Database | ribulose-bisphosphate carboxylase activity | |
| GO:0016984 | IEA | InterPro | ribulose-bisphosphate carboxylase activity | |
| GO:0003729 | IEA | GOA Database | mRNA binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0004497 | IEA | GOA Database | monooxygenase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0009579 | IEA | GOA Database | thylakoid | |
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0022626 | IEA | GOA Database | cytosolic ribosome | |
| GO:0009535 | IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009941 | IEA | GOA Database | chloroplast envelope | |
| GO:0010287 | IEA | GOA Database | plastoglobule | |
| GO:0009570 | IEA | GOA Database | chloroplast stroma | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009507 | IEA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017443 | Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal |
| IPR020888 | Ribulose bisphosphate carboxylase large subunit, type I |
| IPR036376 | Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily |
| IPR036422 | RuBisCO large subunit, N-terminal domain superfamily |
| IPR033966 | RuBisCO |
| IPR000685 | Ribulose bisphosphate carboxylase, large subunit, C-terminal |
| Mapman id | Description |
|---|---|
| 1.2.1.1.1 | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo heterodimer.large subunit |