Gene: BraA09t37863Z

General Information

Structural Information

Species Brassica rapa
Gene Identifier BraA09t37863Z
Transcript Identifier BraA09t37863Z
Gene Type Coding gene
Location A09 : 14591899-14593422 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000567
#Genes/#Species 974/95
Phylogenetic origin

ID ORTHO05D000767
#Genes/#Species 623/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

uniprot A0A3P5XYT2

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010629	ISO	PLAZA Integrative Orthology	negative regulation of gene expression	AT4G00870
GO:0010090	ISO	PLAZA Integrative Orthology	trichome morphogenesis	Solyc08g005050.4
GO:0045893	ISO	PLAZA Integrative Orthology	positive regulation of transcription, DNA-templated	Solyc08g076930.1
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT5G46830
GO:0042538	ISO	PLAZA Integrative Orthology	hyperosmotic salinity response	AT5G46830
GO:0006355	IEA	GOA Database	regulation of transcription, DNA-templated
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0043565	ISO	PLAZA Integrative Orthology	sequence-specific DNA binding	Solyc08g076930.1
GO:0005509	ISO	PLAZA Integrative Orthology	calcium ion binding	AT5G46830
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	Solyc08g076930.1
GO:0003700	IEA	GOA Database	DNA-binding transcription factor activity
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0046983	IEA	GOA Database	protein dimerization activity
GO:0046983	IEA	InterPro	protein dimerization activity
GO:0003677	IEA	GOA Database	DNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT4G00870
GO:0005634	IEA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036638	Helix-loop-helix DNA-binding domain superfamily
IPR045084	Transcription factor AIB/MYC-like
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
IPR025610	Transcription factor MYC/MYB N-terminal

Mapman id	Description
15.5.30	RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)