Gene: BcaC06g34254
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC06g34254
- Transcript Identifier BcaC06g34254
- Gene Type Coding gene
- Location ChrC06 : 25039536-25045347 : negative
Gene Family Information
- ID HOM05D003894
- #Genes/#Species 179/95
- Phylogenetic origin
- ID ORTHO05D004584
- #Genes/#Species 176/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006189 | IEA | InterPro | 'de novo' IMP biosynthetic process | |
| GO:0009058 | IEA | InterPro | biosynthetic process | |
| GO:0009853 | ISO | PLAZA Integrative Orthology | photorespiration | AT5G47435 |
| GO:0046653 | ISO | PLAZA Integrative Orthology | tetrahydrofolate metabolic process | AT5G47435 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008864 | IEA | InterPro | formyltetrahydrofolate deformylase activity | |
| GO:0016742 | IEA | InterPro | hydroxymethyl-, formyl- and related transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G47435 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016031 | Tryptophan RNA-binding attenuator protein-like domain superfamily |
| IPR044074 | Formyltetrahydrofolate deformylase, ACT domain |
| IPR041729 | Formyltetrahydrofolate deformylase, C-terminal hydrolase domain |
| IPR036983 | Mitochondrial biogenesis AIM24 superfamily |
| IPR004810 | Formyltetrahydrofolate deformylase |
| IPR036477 | Formyl transferase, N-terminal domain superfamily |
| IPR002838 | Mitochondrial biogenesis protein AIM24 |
| IPR002376 | Formyl transferase, N-terminal |
| Mapman id | Description |
|---|---|
| 19.2.4.2.1.6 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.associated plant-specific component PAWH |
| 7.5.9 | Coenzyme metabolism.tetrahydrofolate metabolism.tetrahydrofolate deformylase (PURU) |