Gene: Atru.chr13.2294
General Information
Structural Information
- Species Acer truncatum
- Gene Identifier Atru.chr13.2294
- Transcript Identifier Atru.chr13.2294.1
- Gene Type Coding gene
- Location chr13 : 29148848-29153962 : negative
Gene Family Information
- ID HOM05D001829
- #Genes/#Species 358/100
- Phylogenetic origin
- ID ORTHO05D003548
- #Genes/#Species 216/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Atru.chr13.2294.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | IEA | InterPro | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | |
| GO:0048571 | ISO | PLAZA Integrative Orthology | long-day photoperiodism | AT1G33980 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G33980 |
| GO:0009863 | ISO | PLAZA Integrative Orthology | salicylic acid mediated signaling pathway | AT1G33980 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G33980 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT1G33980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001829 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G33980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G33980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039722 | Nonsense-mediated mRNA decay protein 3 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |