Gene: Ah.11g043740
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g043740
- Transcript Identifier Ah.11g043740-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 11784123-11793572 : negative
Gene Family Information
- ID HOM05D000280
- #Genes/#Species 1564/100
- Phylogenetic origin
- ID ORTHO05D006100
- #Genes/#Species 147/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Ah.11g043740-v1.1.a1
Descriptions
- Description HBS1-like protein (ERFS)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0070481 | ISO | PLAZA Integrative Orthology | nuclear-transcribed mRNA catabolic process, non-stop decay | AT5G10630 |
GO:0006414 | ISO | PLAZA Homology (enrichment) | translational elongation | HOM05D000280 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003924 | IEA | InterPro | GTPase activity | |
GO:0005525 | IEA | InterPro | GTP binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G10630 |
GO:0003746 | ISO | PLAZA Homology (enrichment) | translation elongation factor activity | HOM05D000280 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR036443 | Zinc finger, RanBP2-type superfamily |
IPR004160 | Translation elongation factor EFTu/EF1A, C-terminal |
IPR000795 | Translational (tr)-type GTP-binding domain |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR009000 | Translation protein, beta-barrel domain superfamily |
IPR001876 | Zinc finger, RanBP2-type |
IPR009001 | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |