Gene: Ah.10g034500
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.10g034500
- Transcript Identifier Ah.10g034500-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_10 : 17227415-17237407 : negative
Gene Family Information
- ID HOM05D000575
- #Genes/#Species 966/99
- Phylogenetic origin
- ID ORTHO05D004448
- #Genes/#Species 180/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Ah.10g034500-v1.1.a1
Descriptions
- Description Serine hydroxymethyltransferase 3, chloroplastic (AtSHMT3) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 3) (Serine methylase 3)
- note Serine hydroxymethyltransferase 3, chloroplastic (AtSHMT3) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 3) (Serine methylase 3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019264 | IEA | InterPro | glycine biosynthetic process from serine | |
| GO:0035999 | IEA | InterPro | tetrahydrofolate interconversion |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004372 | IEA | InterPro | glycine hydroxymethyltransferase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G32520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G32520 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT4G32520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001085 | Serine hydroxymethyltransferase |
| IPR039429 | Serine hydroxymethyltransferase-like domain |
| IPR036249 | Thioredoxin-like superfamily |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR013766 | Thioredoxin domain |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |