Gene: Ah.05g169710

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.05g169710
  • Transcript Identifier Ah.05g169710-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_5 : 4072853-4103330 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.05g169710-v1.1.a1

Descriptions

  • Description Probable galacturan 1,4-alpha-galacturonidase SALK6 (EC 3.2.1.67) (Exopolygalacturonase SALK6) (Pollen allergen Sal k 6) (allergen Sal k 6)
  • note Probable galacturan 1,4-alpha-galacturonidase SALK6 (EC 3.2.1.67) (Exopolygalacturonase SALK6) (Pollen allergen Sal k 6) (allergen Sal k 6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT2G33160
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G33160
GO:0080159
ISO
PLAZA Integrative Orthologyzygote elongation AT2G33160
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT1G78400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G33160
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G78400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase