Gene: Aa31LG5G16820
General Information
Structural Information
- Species Aethionema arabicum
- Gene Identifier Aa31LG5G16820
- Transcript Identifier Aa31LG5G16820.mRNA1
- Gene Type Coding gene
- Location LG-5 : 6464070-6467275 : positive
Gene Family Information
- ID HOM05D000373
- #Genes/#Species 1301/100
- Phylogenetic origin
- ID ORTHO05D001146
- #Genes/#Species 475/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Aa31LG5G16820.mRNA1
- Alias Aa31LG5G16820
- Alias Aa31LG5G16820-mRNA-1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation | |
| GO:0080147 | ISO | PLAZA Integrative Orthology | root hair cell development | AT3G06300 |
| GO:0018401 | ISO | PLAZA Integrative Orthology | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | AT3G06300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016705 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| GO:0031418 | IEA | InterPro | L-ascorbic acid binding | |
| GO:0004656 | ISO | PLAZA Integrative Orthology | procollagen-proline 4-dioxygenase activity | AT3G06300 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT3G06300 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT3G06300 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G06300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001705 | Ribosomal protein L33 |
| IPR038584 | Ribosomal protein L33 superfamily |
| IPR003582 | ShKT domain |
| IPR006620 | Prolyl 4-hydroxylase, alpha subunit |
| IPR044862 | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain |
| IPR011332 | Zinc-binding ribosomal protein |
| IPR045054 | Prolyl 4-hydroxylase |
| Mapman id | Description |
|---|---|
| 17.7.1.1.28 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL33 |
| 18.9.1 | Protein modification.hydroxylation.prolyl hydroxylase |