Gene: ATR0693G377

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0693G377
  • Transcript Identifier ATR0693G377.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00003 : 2274077-2276412 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00003.124.v1.0
  • pacid 31565658

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071704
IEA
InterProorganic substance metabolic process
GO:0009828
ISO
PLAZA Integrative Orthologyplant-type cell wall loosening AT5G66460
GO:1990059
ISO
PLAZA Integrative Orthologyfruit valve development AT5G66460
GO:0071585
ISO
PLAZA Integrative Orthologydetoxification of cadmium ion AT3G10890
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G10890
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G66460
GO:0010047
ISO
PLAZA Integrative Orthologyfruit dehiscence AT5G66460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001
GO:0016985
ISO
PLAZA Integrative Orthologymannan endo-1,4-beta-mannosidase activity Solyc01g008710.5.1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall Solyc01g008710.5.1
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G10890
GO:0071944
ISO
PLAZA Integrative Orthologycell periphery AT5G66460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001547 Glycoside hydrolase, family 5
IPR017853 Glycoside hydrolase superfamily
IPR045053 Mannan endo-1,4-beta-mannosidase-like
Mapman id Description
21.2.3.2.2 Cell wall organisation.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase