Gene: ATR0680G269
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0680G269
- Transcript Identifier ATR0680G269.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00009 : 4145746-4146627 : positive
Gene Family Information
- ID HOM05D000773
- #Genes/#Species 761/96
- Phylogenetic origin
- ID ORTHO05D000588
- #Genes/#Species 758/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00009.144.v1.0
- pacid 31568883
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048235 | ISO | PLAZA Integrative Orthology | pollen sperm cell differentiation | AT2G46040 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT2G46040 |
| GO:0016575 | ISO | PLAZA Integrative Orthology | histone deacetylation | AT2G46040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G11400 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048555 | ISO | PLAZA Integrative Orthology | generative cell nucleus | AT2G46040 |
| GO:0000118 | ISO | PLAZA Integrative Orthology | histone deacetylase complex | AT2G46040 |
| GO:0048556 | ISO | PLAZA Integrative Orthology | microsporocyte nucleus | AT2G46040 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G11400 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001005 | SANT/Myb domain |
| Mapman id | Description |
|---|---|
| 15.5.25 | RNA biosynthesis.transcriptional regulation.transcription factor (ARID) |