Gene: ATR0680G080

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0680G080
  • Transcript Identifier ATR0680G080.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00009 : 8948791-8953042 : negative

Gene Family Information

  • ID HOM05D001301
  • #Genes/#Species 483/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00009.407.v1.0
  • pacid 31568606

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0072583
ISO
PLAZA Integrative Orthologyclathrin-dependent endocytosis AT2G20760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
InterProstructural molecule activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT2G40060
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G40060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030130
IEA
InterProclathrin coat of trans-Golgi network vesicle
GO:0030132
IEA
InterProclathrin coat of coated pit
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G40060
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G20760
GO:0009504
ISO
PLAZA Integrative Orthologycell plate AT2G40060
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G20760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000996 Clathrin light chain
Mapman id Description
22.3.1.1.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.light chain