Gene: ATR0665G348
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0665G348
- Transcript Identifier ATR0665G348.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00002 : 6327886-6332493 : positive
Gene Family Information
- ID HOM05D001605
- #Genes/#Species 401/100
- Phylogenetic origin
- ID ORTHO05D003014
- #Genes/#Species 248/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00002.351.v1.0
- pacid 31562776
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0032784 | IEA | InterPro | regulation of DNA-templated transcription, elongation |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005100 | NGN domain |
| IPR039385 | NGN domain, eukaryotic |
| IPR014722 | Ribosomal protein L2, domain 2 |
| IPR036735 | NusG, N-terminal domain superfamily |
| IPR006645 | NusG, N-terminal |
| IPR008991 | Translation protein SH3-like domain superfamily |
| IPR041975 | Spt5, KOW domain repeat 2 |
| IPR041976 | Spt5, KOW domain repeat 3 |
| IPR005824 | KOW |
| IPR039659 | Transcription elongation factor SPT5 |
| IPR041977 | Spt5, KOW domain repeat 4 |
| IPR041973 | Spt5, KOW domain repeat 1 |
| Mapman id | Description |
|---|---|
| 15.3.5.3.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5 |