Gene: ATR0580G443

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0580G443
  • Transcript Identifier ATR0580G443.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00019 : 6687618-6709815 : negative

Gene Family Information

  • ID HOM05D001232
  • #Genes/#Species 504/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00019.427.v1.0
  • pacid 31572208

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT4G24470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005515
IEA
InterProprotein binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G51600
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G51600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G24470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010399 Tify domain
IPR000679 Zinc finger, GATA-type
IPR010402 CCT domain
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA)