Gene: ATR0561G119
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0561G119
- Transcript Identifier ATR0561G119.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00013 : 2610401-2618558 : positive
Gene Family Information
- ID HOM05D005653
- #Genes/#Species 136/98
- Phylogenetic origin
- ID ORTHO05D007013
- #Genes/#Species 135/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00013.89.v1.0
- pacid 31550636
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019752 | IEA | InterPro | carboxylic acid metabolic process | |
| GO:0030149 | ISO | PLAZA Integrative Orthology | sphingolipid catabolic process | AT1G27980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016830 | IEA | InterPro | carbon-carbon lyase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0008117 | ISO | PLAZA Integrative Orthology | sphinganine-1-phosphate aldolase activity | AT1G27980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT1G27980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.7.5.4 | Lipid metabolism.lipid degradation.sphingolipid degradation.sphingosine-1-phosphate lyase |