Gene: ATR0561G102
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0561G102
- Transcript Identifier ATR0561G102.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00013 : 982203-1010056 : negative
Gene Family Information
- ID HOM05D000660
- #Genes/#Species 863/99
- Phylogenetic origin
- ID ORTHO05D000766
- #Genes/#Species 623/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00013.39.v1.0
- pacid 31550758
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G67310 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000660 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G67310 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G67310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002110 | Ankyrin repeat |
| IPR013783 | Immunoglobulin-like fold |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014756 | Immunoglobulin E-set |
| IPR000048 | IQ motif, EF-hand binding site |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR002909 | IPT domain |
| IPR020683 | Ankyrin repeat-containing domain |
| Mapman id | Description |
|---|---|
| 15.5.26 | RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA) |