Gene: ATR0317G110

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0317G110
  • Transcript Identifier ATR0317G110.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00106 : 1356762-1361523 : positive

Gene Family Information

  • ID HOM05D000181
  • #Genes/#Species 2101/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00106.79.v1.0
  • pacid 31550172

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010205
ISO
PLAZA Integrative Orthologyphotoinhibition AT2G30950
GO:0010304
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II catabolic process AT1G06430
GO:0010206
ISO
PLAZA Integrative Orthologyphotosystem II repair AT2G30950
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT2G30950
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT2G30950
GO:0072593
ISO
PLAZA Integrative Orthologyreactive oxygen species metabolic process AT2G30950
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G30950
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT2G30950
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008233
ISO
PLAZA Integrative Orthologypeptidase activity AT5G15250
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0008270
IEA
InterProzinc ion binding
GO:0005524
IEA
InterProATP binding
GO:0004222
IEA
InterPrometalloendopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT2G30950
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G06430
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G06430
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G06430
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G06430
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G06430
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041569 AAA ATPase, AAA+ lid domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000642 Peptidase M41
IPR037219 Peptidase M41-like
IPR003593 AAA+ ATPase domain
IPR011546 Peptidase M41, FtsH extracellular
IPR003959 ATPase, AAA-type, core
IPR005936 Peptidase, FtsH
Mapman id Description
1.1.1.4.2 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.protease (FtsH2/8)
19.4.5.8.2.1 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.component FtsH1/2/5/6/8