Gene: ATR0001G009

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0001G009
  • Transcript Identifier ATR0001G009.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00133 : 1239836-1256850 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00133.46.v1.0
  • pacid 31565033

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g052980.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G58510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT3G58510
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G42520
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G58510
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G58510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR044763 Ded1/Dbp1, DEAD-box helicase domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated