Gene: ATCG00810
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier ATCG00810
- Transcript Identifier ATCG00810.1
- Gene Type Coding gene
- Location ChrC : 83467-83949 : negative
Gene Family Information
- ID HOM05D002578
- #Genes/#Species 264/71
- Phylogenetic origin
- ID ORTHO05D002698
- #Genes/#Species 269/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid ATCG00810.1
- symbol RPL22
- uniprot P56795
Descriptions
- Description ribosomal protein L22
- Computational description ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1).
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | TAS | Gene Ontology | translation | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0042255 | IBA | Gene Ontology | ribosome assembly | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IBA TAS | Gene Ontology | structural constituent of ribosome | 1 |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0019843 | IEA | GOA Database | rRNA binding | |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA IEA | GOA Database | chloroplast | |
| GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 3 |
| GO:0015934 | IEA | GOA Database | large ribosomal subunit | |
| GO:0015934 | IBA | Gene Ontology | large ribosomal subunit | 1 |
| GO:0015934 | IEA | InterPro | large ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 4 |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 5 |
| GO:0009570 | IDA | GOA Database | chloroplast stroma | |
| GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 5 |
| GO:0000311 | TAS | Gene Ontology | plastid large ribosomal subunit |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.2.1.20 | Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL22 |