Gene: AT5G66470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G66470
  • Transcript Identifier AT5G66470.2
  • Gene Type Coding gene
  • Location Chr5 : 26541986-26544302 : negative

Gene Family Information

  • ID HOM05D006011
  • #Genes/#Species 131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G66470.2
  • Alias Era-1
  • uniprot Q8VZ74

Descriptions

  • Description GTP-binding protein Era-like protein
  • Computational description RNA binding;GTP binding; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 2 (InterPro:IPR004044), K Homology, prokaryotic type (InterPro:IPR009019), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G30960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
ISS
Gene Ontologyribosome biogenesis
GO:0006364
ISS
Gene OntologyrRNA processing
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0043024
IBA
Gene Ontologyribosomal small subunit binding1
GO:0019843
IBA
Gene OntologyrRNA binding1
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0042644
ISS
Gene Ontologychloroplast nucleoid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR030388 Era-type guanine nucleotide-binding (G) domain
IPR015946 K homology domain-like, alpha/beta
IPR004044 K Homology domain, type 2
IPR009019 K homology domain superfamily, prokaryotic type
IPR005225 Small GTP-binding protein domain
IPR006073 GTP binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005662 GTP-binding protein Era
Mapman id Description
35.1 not assigned.annotated