Gene: AT5G64840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G64840
  • Transcript Identifier AT5G64840.1
  • Gene Type Coding gene
  • Location Chr5 : 25916956-25919693 : negative

Gene Family Information

  • ID HOM05D000681
  • #Genes/#Species 839/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G64840.1
  • symbol ABCF5
  • Alias ATGCN5,general control non-repressible 5,GCN5,general control non-repressible 5
  • full_name ATP-binding cassette F5
  • uniprot Q9LV93

Descriptions

  • Description general control non-repressible 5
  • Computational description general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009624
HEP
Gene Ontologyresponse to nematode1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IBA
Gene OntologyATP binding3
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR003439 ABC transporter-like, ATP-binding domain
IPR032781 ABC-transporter extension domain
Mapman id Description
35.1 not assigned.annotated