Gene: AT5G60460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G60460
  • Transcript Identifier AT5G60460.1
  • Gene Type Coding gene
  • Location Chr5 : 24317590-24317919 : negative

Gene Family Information

  • ID HOM05D001998
  • #Genes/#Species 331/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G60460.1
  • uniprot Q9FKK1

Descriptions

  • Description Preprotein translocase Sec, Sec61-beta subunit protein
  • Computational description Preprotein translocase Sec, Sec61-beta subunit protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482), Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609); BEST Arabidopsis thaliana protein match is: Preprotein translocase Sec, Sec61-beta subunit protein (TAIR:AT3G60540.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071816
ISO
PLAZA Integrative Orthologytail-anchored membrane protein insertion into ER membrane Cre07.g318450
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0031204
IBA
Gene Ontologyposttranslational protein targeting to membrane, translocation1
GO:0006616
IBA
Gene OntologySRP-dependent cotranslational protein targeting to membrane, translocation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Cre07.g318450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus2
GO:0005784
IEA
Gene OntologySec61 translocon complex
GO:0005784
IEA
InterProSec61 translocon complex
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane1
GO:0009536
HDA
Gene Ontologyplastid3
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016482 Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 Protein transport Sec61-beta/Sbh
Mapman id Description
23.3.1.3.2 Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.subunit beta