Gene: AT5G59420
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G59420
- Transcript Identifier AT5G59420.1
- Gene Type Coding gene
- Location Chr5 : 23961731-23964623 : positive
Gene Family Information
- ID HOM05D000758
- #Genes/#Species 771/99
- Phylogenetic origin
- ID ORTHO05D002867
- #Genes/#Species 257/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G59420.1
- symbol ORP3C
- uniprot Q93Y40
Descriptions
- Description OSBP(oxysterol binding protein)-related protein 3C
- Computational description OSBP(oxysterol binding protein)-related protein 3C (ORP3C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B (TAIR:AT3G09300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015918 | IEA | GOA Database | sterol transport | |
| GO:0006869 | IEA | GOA Database | lipid transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032934 | IBA | Gene Ontology | sterol binding | 1 |
| GO:0015248 | IBA | Gene Ontology | sterol transporter activity | 1 |
| GO:0008289 | IEA | GOA Database | lipid binding | |
| GO:0008289 | IEA | InterPro | lipid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA IBA | Gene Ontology | cytosol | 1 2 |
| GO:0009536 | HDA | Gene Ontology | plastid | 3 |
| GO:0043231 | IBA | Gene Ontology | intracellular membrane-bounded organelle | 1 |
| GO:0016020 | IBA | Gene Ontology | membrane | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.8.1.1 | Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.lipid transfer protein (ORP3a) |