Gene: AT5G58575

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58575
  • Transcript Identifier AT5G58575.1
  • Gene Type Coding gene
  • Location Chr5 : 23674399-23675224 : positive

Gene Family Information

  • ID HOM05D005995
  • #Genes/#Species 131/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58575.1
  • uniprot Q94BV2

Descriptions

  • Description SAGA-associated factor-like protein
  • Computational description CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035616
IMP
IBA
Gene Ontologyhistone H2B conserved C-terminal lysine deubiquitination1 2
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0070461
IPI
IBA
Gene OntologySAGA-type complex1 2
GO:0071819
IPI
IBA
Gene OntologyDUBm complex1 2
GO:0005654
IEA
GOA Databasenucleoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013246 SAGA complex, Sgf11 subunit
Mapman id Description
15.3.4.3.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.DUB histone deubiquitinating module.component SGF11