Gene: AT5G58330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58330
  • Transcript Identifier AT5G58330.1
  • Gene Type Coding gene
  • Location Chr5 : 23580010-23582287 : negative

Gene Family Information

  • ID HOM05D001289
  • #Genes/#Species 486/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58330.1
  • Alias NADP-MDH,NADP-dependent Malate Dehydrogenase
  • uniprot Q8H1E2

Descriptions

  • Description lactate/malate dehydrogenase family protein
  • Computational description lactate/malate dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, malate dehydrogenase activity, catalytic activity, malate dehydrogenase (NADP ) activity; INVOLVED IN: oxidation reduction, malate metabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 10000 Blast hits to 9996 proteins in 2628 species: Archae - 125; Bacteria - 6319; Metazoa - 780; Fungi - 166; Plants - 568; Viruses - 0; Other Eukaryotes - 2042 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006108
IBA
IEA
Gene Ontologymalate metabolic process1
GO:0006108
IEA
InterPromalate metabolic process
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0019752
ISO
PLAZA Homology (enrichment)carboxylic acid metabolic process HOM05D001289
GO:0051775
IMP
Gene Ontologyresponse to redox state2
GO:0006107
IBA
Gene Ontologyoxaloacetate metabolic process1
GO:0006099
IBA
Gene Ontologytricarboxylic acid cycle1
GO:0006734
IBA
Gene OntologyNADH metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016616
IEA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016615
IEA
GOA Databasemalate dehydrogenase activity
GO:0016615
IEA
InterPromalate dehydrogenase activity
GO:0046554
IEA
Gene Ontologymalate dehydrogenase (NADP+) activity
GO:0046554
IEA
InterPromalate dehydrogenase (NADP+) activity
GO:0030060
IBA
IEA
Gene OntologyL-malate dehydrogenase activity1
GO:0008746
IMP
Gene OntologyNAD(P)+ transhydrogenase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope4
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion5
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast6
GO:0009579
IDA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid7
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid8
GO:0009570
IDA, HDA
Gene Ontologychloroplast stroma2 9
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010945 Malate dehydrogenase, type 2
IPR022383 Lactate/malate dehydrogenase, C-terminal
IPR001236 Lactate/malate dehydrogenase, N-terminal
IPR036291 NAD(P)-binding domain superfamily
IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR011273 Malate dehydrogenase, NADP-dependent, plants
Mapman id Description
1.2.12 Photosynthesis.calvin cycle.NADPH-dependent malate dehydrogenase