Gene: AT5G58060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58060
  • Transcript Identifier AT5G58060.1
  • Gene Type Coding gene
  • Location Chr5 : 23498277-23500128 : positive

Gene Family Information

  • ID HOM05D003310
  • #Genes/#Species 206/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58060.1
  • symbol YKT61
  • uniprot Q9ZRD6

Descriptions

  • Description SNARE-like superfamily protein
  • Computational description YKT61; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: Synaptobrevin family protein (TAIR:AT5G58180.2); Has 1443 Blast hits to 1443 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 302; Plants - 452; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
Gene Ontologyvesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IPI
Gene OntologySNARE binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
Gene Ontologyintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005794
HDA
Gene OntologyGolgi apparatus2
GO:0009536
HDA
Gene Ontologyplastid3
GO:0005737
IDA
Gene Ontologycytoplasm1
GO:0031982
IDA
Gene Ontologyvesicle1
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010908 Longin domain
IPR011012 Longin-like domain superfamily
IPR001388 Synaptobrevin
Mapman id Description
22.3.5.1.5.2 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.YKT6-group component