Gene: AT5G57370
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G57370
- Transcript Identifier AT5G57370.1
- Gene Type Coding gene
- Location Chr5 : 23244811-23245470 : positive
Gene Family Information
- ID HOM05D007606
- #Genes/#Species 97/79
- Phylogenetic origin
- ID ORTHO05D009600
- #Genes/#Species 97/79
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G57370.1
- uniprot Q9FIE4
Descriptions
- Description U4/U6.U5 small nuclear ribonucleoprotein
- Computational description unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0008380 | IEA | InterPro | RNA splicing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005829 | IDA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013957 | U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein |
| Mapman id | Description |
|---|---|
| 16.2.1.5.1 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (snRNP27) |